STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM40849.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
KRM40850.1
Membrane protein.
 
     0.634
KRM40851.1
MarR family transcriptional regulator.
 
     0.536
KRM37477.1
Site-specific recombinase, phage integrase family.
  
     0.461
KRM40852.1
Acetyltransferase, gnat family protein.
  
   0.451
KRM40456.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
     0.439
KRM40129.1
ABC transporter.
  
    0.434
KRM40115.1
Transcriptional regulator.
  
     0.419
KRM40117.1
Hypothetical protein.
  
     0.419
KRM40578.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Lactobacillus hamsteri
NCBI taxonomy Id: 1423754
Other names: L. hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri DSM 5661, Lactobacillus hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri JCM 6256, Lactobacillus hamsteri JCM 6256 = DSM 5661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.