STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM40645.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
KRM40780.1
Ser Thr protein phosphatase.
 
    0.780
KRM40958.1
2,3-cyclic nucleotide.
  
     0.775
KRM37183.1
Hypothetical protein.
  
     0.773
KRM41160.1
Hypothetical protein.
  
     0.770
KRM39385.1
Hypothetical protein.
  
     0.763
KRM38447.1
Hypothetical protein.
  
     0.762
KRM41066.1
Hypothetical protein.
  
     0.757
KRM40079.1
CvpA family protein.
  
     0.755
KRM40628.1
Transcriptional regulator.
  
     0.752
KRM39384.1
Lipoprotein.
  
     0.725
Your Current Organism:
Lactobacillus hamsteri
NCBI taxonomy Id: 1423754
Other names: L. hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri DSM 5661, Lactobacillus hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri JCM 6256, Lactobacillus hamsteri JCM 6256 = DSM 5661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.