STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM39923.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
KRM41312.1
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.977
galT
Galactose-1-phosphate uridylyltransferase.
     
 0.952
KRM39924.1
Hypothetical protein.
 
  
 0.929
KRM39921.1
Capsular biosynthesis protein.
 
  
 0.891
KRM40732.1
Oxidoreductase.
  
 
 0.729
KRM40278.1
Capsular polysaccharide synthesis protein.
 
  
 0.672
KRM38463.1
PTS family fructose mannitol (fru) porter component IIABC.
     
 0.670
KRM39925.1
Hypothetical protein.
       0.640
KRM39125.1
UTP-hexose-1-phosphate uridylyltransferase.
    
 0.583
KRM39916.1
Sugar-transferase.
     
 0.539
Your Current Organism:
Lactobacillus hamsteri
NCBI taxonomy Id: 1423754
Other names: L. hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri DSM 5661, Lactobacillus hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri JCM 6256, Lactobacillus hamsteri JCM 6256 = DSM 5661
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