STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM41257.1Oligopeptide transport protein. (319 aa)    
Predicted Functional Partners:
KRM41256.1
Oligopeptide ABC transporter protein.
 
 0.999
KRM41258.1
Abc-type oligopeptide transport system, atpase component; Belongs to the ABC transporter superfamily.
 
 0.999
KRM41259.1
Oligopeptide ABC transporter; Belongs to the ABC transporter superfamily.
 0.999
KRM41255.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.972
KRM41254.1
Peptide ABC transporter, peptide-binding protein.
 
 0.965
KRM40378.1
Oligopeptide ABC transporter, oligopeptide-binding protein.
 
 0.954
guaA
Bifunctional GMP synthase glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.773
KRM40653.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
 
 0.616
KRM40517.1
ABC superfamily ATP binding cassette transporter.
 
 
 0.616
KRM40383.1
Membrane protein.
  
 
 0.616
Your Current Organism:
Lactobacillus hamsteri
NCBI taxonomy Id: 1423754
Other names: L. hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri DSM 5661, Lactobacillus hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri JCM 6256, Lactobacillus hamsteri JCM 6256 = DSM 5661
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