STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM19407.1Two component response regulator. (241 aa)    
Predicted Functional Partners:
KRM19408.1
Two component system histidine kinase.
  0.988
KRM18338.1
Two component system histidine kinase.
 0.940
KRM19716.1
Two-component sensor kinase sa14-24.
 0.931
KRM19665.1
Sensor histidine kinase.
  0.927
KRM18765.1
ATPase histidine kinase DNA gyrase B HSP90 domain protein.
 0.894
KRM19587.1
Signal transduction histidine kinase.
 
 0.822
KRM18928.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.772
dinB
Dna polymerase iv; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.762
KRM19965.1
Hypothetical protein.
  
  0.740
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
   0.579
Your Current Organism:
Lactobacillus hayakitensis
NCBI taxonomy Id: 1423755
Other names: L. hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis DSM 18933, Lactobacillus hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis JCM 14209, Lactobacillus hayakitensis JCM 14209 = DSM 18933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.