STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM20352.1Membrane protein. (894 aa)    
Predicted Functional Partners:
KRM18771.1
Hypothetical protein.
  
     0.759
KRM18770.1
Hypothetical protein.
  
     0.747
KRM18769.1
Hypothetical protein.
  
     0.732
KRM19629.1
Transcriptional regulator, xre family.
  
     0.732
KRM18850.1
Hypothetical protein.
  
     0.694
KRM19736.1
Hypothetical protein.
  
     0.651
KRM20338.1
Hypothetical protein.
  
     0.642
KRM19097.1
Rod shape-determining protein.
  
    0.635
KRM20443.1
Hypothetical protein.
  
     0.612
KRM20351.1
Teichoic acid glycosylation protein GtrA.
 
  
 0.583
Your Current Organism:
Lactobacillus hayakitensis
NCBI taxonomy Id: 1423755
Other names: L. hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis DSM 18933, Lactobacillus hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis JCM 14209, Lactobacillus hayakitensis JCM 14209 = DSM 18933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.