STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM19038.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
KRM19915.1
Spermidine putrescine abc transporter permease.
 
 0.994
KRM19913.1
Spermidine putrescine abc transporter permease component potc.
 
 
 0.970
KRM19914.1
Spermidine putrescine abc transporter permease component potc.
 
 
 0.968
KRM17745.1
ABC-type proline glycine betaine transporter.
    
  0.884
KRM17744.1
Choline ABC transporter ATP binding protein.
  
  
  0.628
KRM19049.1
Late competence protein comec, dna transport.
  
  
 0.485
KRM19039.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.474
KRM19423.1
Abc transporter, atp-binding protein ecsa.
  
  
  0.462
KRM19660.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
 
  0.415
KRM19093.1
Amino acid abc transporter, atp-binding protein.
 
     0.410
Your Current Organism:
Lactobacillus hayakitensis
NCBI taxonomy Id: 1423755
Other names: L. hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis DSM 18933, Lactobacillus hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis JCM 14209, Lactobacillus hayakitensis JCM 14209 = DSM 18933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.