STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM19508.1Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1051 aa)    
Predicted Functional Partners:
KRM19507.1
Type I restriction-modification system, M subunit.
 
 0.994
KRM19305.1
Type I restriction-modification system modification subunit.
 
 0.971
KRM19506.1
HsdS subunit.
     0.950
KRM19504.1
Restriction modification system DNA specificity domain.
 
  
 0.898
KRM19509.1
Hypothetical protein.
  
  
 0.883
KRM17632.1
Type I restriction-modification system specificty subunit.
 
  
 0.790
KRM19505.1
Integrase family protein; Belongs to the 'phage' integrase family.
 
     0.633
KRM17897.1
Integral membrane protein.
  
    0.515
KRM19304.1
Hypothetical protein.
  
  
 0.496
Your Current Organism:
Lactobacillus hayakitensis
NCBI taxonomy Id: 1423755
Other names: L. hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis DSM 18933, Lactobacillus hayakitensis DSM 18933 = JCM 14209, Lactobacillus hayakitensis JCM 14209, Lactobacillus hayakitensis JCM 14209 = DSM 18933
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