STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM84768.1Abc transporter permease component. (542 aa)    
Predicted Functional Partners:
KRM84769.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.998
KRM84479.1
ABC-type polar amino acid transport system, ATPase component.
 0.991
KRM84492.1
Glutamine ABC transporter ATPase component.
 0.991
KRM85414.1
ABC-type polar amino acid transport system, ATPase component.
 0.979
KRM84480.1
Abc-type amino acid transport.
 
0.921
KRM85413.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
0.786
KRM85196.1
Resistance ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.686
KRM85691.1
ABC-type polysaccharide polyol phosphate export system, permease component.
    
 0.685
KRM85692.1
ABC transporter, ATP-binding protein.
   
 0.685
KRM85710.1
ABC superfamily ATP binding cassette transporter, ABC protein.
    
 0.685
Your Current Organism:
Lactobacillus hominis
NCBI taxonomy Id: 1423758
Other names: L. hominis DSM 23910 = CRBIP 24.179, Lactobacillus hominis 61D, Lactobacillus hominis CRBIP 24.179, Lactobacillus hominis CRBIP 24.179 = DSM 23910, Lactobacillus hominis DSM 23910, Lactobacillus hominis DSM 23910 = CRBIP 24.179, Lactobacillus sp. 61D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.