STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM84774.1Di- and tricarboxylate transporter. (326 aa)    
Predicted Functional Partners:
KRM84671.1
Hypothetical protein.
  
     0.581
KRM84775.1
LemA-like protein.
     
 0.537
htpX
Protease htpx-like protein; Belongs to the peptidase M48B family.
       0.523
KRM84773.1
Hypothetical protein; Belongs to the HesB/IscA family.
 
     0.512
KRM85136.1
Cell wall-associated hydrolase.
 
     0.446
KRM85930.1
Aminoglycoside N3-acetyltransferase.
      
 0.422
KRM84762.1
Hypothetical protein.
  
     0.422
KRM85505.1
Transcriptional regulator.
  
  
 0.416
Your Current Organism:
Lactobacillus hominis
NCBI taxonomy Id: 1423758
Other names: L. hominis DSM 23910 = CRBIP 24.179, Lactobacillus hominis 61D, Lactobacillus hominis CRBIP 24.179, Lactobacillus hominis CRBIP 24.179 = DSM 23910, Lactobacillus hominis DSM 23910, Lactobacillus hominis DSM 23910 = CRBIP 24.179, Lactobacillus sp. 61D
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