STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM85189.1Sugar hydrolase. (688 aa)    
Predicted Functional Partners:
KRM85187.1
Hypothetical protein.
    0.980
KRM85188.1
Transcription regulator.
 
     0.930
KRM85186.1
Alpha-mannosidase.
 
     0.880
KRM85185.1
Family 20 glycoside hydrolase.
 
   
 0.821
KRM85180.1
Sugar ABC transporter substrate-binding protein.
 
     0.770
KRM85178.1
yesM protein.
 
     0.743
KRM85177.1
Response regulator.
  
     0.667
KRM85176.1
Helix-turn-helix, Fis-type.
  
     0.655
KRM85182.1
Sugar abc transporter, permease protein.
 
     0.575
KRM85181.1
Carbohydrate abc superfamily atp binding cassette transporter, membrane protein.
 
     0.560
Your Current Organism:
Lactobacillus hominis
NCBI taxonomy Id: 1423758
Other names: L. hominis DSM 23910 = CRBIP 24.179, Lactobacillus hominis 61D, Lactobacillus hominis CRBIP 24.179, Lactobacillus hominis CRBIP 24.179 = DSM 23910, Lactobacillus hominis DSM 23910, Lactobacillus hominis DSM 23910 = CRBIP 24.179, Lactobacillus sp. 61D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.