Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRM85030.1 | KRM85031.1 | FC41_GL001591 | FC41_GL001592 | GatB Yqey family protein. | Phosphate starvation-inducible protein PhoH, ATPase. | 0.783 |
| KRM85030.1 | era | FC41_GL001591 | FC41_GL001594 | GatB Yqey family protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.662 |
| KRM85030.1 | recO | FC41_GL001591 | FC41_GL001595 | GatB Yqey family protein. | Dna repair protein; Involved in DNA repair and RecF pathway recombination. | 0.649 |
| KRM85030.1 | ybeY | FC41_GL001591 | FC41_GL001593 | GatB Yqey family protein. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.783 |
| KRM85031.1 | KRM85030.1 | FC41_GL001592 | FC41_GL001591 | Phosphate starvation-inducible protein PhoH, ATPase. | GatB Yqey family protein. | 0.783 |
| KRM85031.1 | era | FC41_GL001592 | FC41_GL001594 | Phosphate starvation-inducible protein PhoH, ATPase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.776 |
| KRM85031.1 | recO | FC41_GL001592 | FC41_GL001595 | Phosphate starvation-inducible protein PhoH, ATPase. | Dna repair protein; Involved in DNA repair and RecF pathway recombination. | 0.872 |
| KRM85031.1 | ybeY | FC41_GL001592 | FC41_GL001593 | Phosphate starvation-inducible protein PhoH, ATPase. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.972 |
| KRM85991.1 | polA | FC41_GL000184 | FC41_GL001015 | Recombination protein J. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.788 |
| KRM85991.1 | recF | FC41_GL000184 | FC41_GL001708 | Recombination protein J. | Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.554 |
| KRM85991.1 | recO | FC41_GL000184 | FC41_GL001595 | Recombination protein J. | Dna repair protein; Involved in DNA repair and RecF pathway recombination. | 0.612 |
| KRM85991.1 | recR | FC41_GL000184 | FC41_GL001407 | Recombination protein J. | Recombination protein R; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.647 |
| KRM85991.1 | recX | FC41_GL000184 | FC41_GL000581 | Recombination protein J. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.668 |
| KRM85991.1 | topA | FC41_GL000184 | FC41_GL001659 | Recombination protein J. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.840 |
| era | KRM85030.1 | FC41_GL001594 | FC41_GL001591 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | GatB Yqey family protein. | 0.662 |
| era | KRM85031.1 | FC41_GL001594 | FC41_GL001592 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Phosphate starvation-inducible protein PhoH, ATPase. | 0.776 |
| era | recO | FC41_GL001594 | FC41_GL001595 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Dna repair protein; Involved in DNA repair and RecF pathway recombination. | 0.918 |
| era | topA | FC41_GL001594 | FC41_GL001659 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.588 |
| era | ybeY | FC41_GL001594 | FC41_GL001593 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.897 |
| polA | KRM85991.1 | FC41_GL001015 | FC41_GL000184 | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Recombination protein J. | 0.788 |
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