STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL08256.1Purine or other phosphorylase family 1. (256 aa)    
Predicted Functional Partners:
KRL08257.1
Cystathionine beta-lyase cystathionine gamma-synthase.
       0.558
KRL07167.1
Hypothetical protein.
  
     0.558
KRL08258.1
Cysteine synthase.
       0.544
KRL06178.1
Oligopeptide transport system permease protein AmiC.
  
     0.462
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.461
KRL07073.1
GNAT family acetyltransferase.
  
     0.457
KRL08254.1
Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.456
KRL08255.1
Hypothetical protein.
       0.456
KRL07168.1
Hypothetical protein.
  
     0.446
KRL05238.1
Transcription regulator.
  
     0.438
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.