STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL06787.1Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (326 aa)    
Predicted Functional Partners:
KRL08305.1
Di-trans-poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.944
KRL06786.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.922
KRL08322.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.911
KRL06785.1
Pyridine nucleotide-disulfide family oxidoreductase.
 
  
 0.909
KRL06788.1
Transport ATP-binding protein CydD.
  
     0.762
KRL06789.1
Transport ATP-binding protein CydC.
  
     0.741
menG
Menaquinone biosynthesis methyltransferase MenH; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
  
 0.675
KRL06790.1
Cytochrome d ubiquinol oxidase, subunit II.
  
    0.606
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.594
KRL05235.1
Nucleoside diphosphate kinase; Belongs to the NDK family.
  
 
 0.552
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.