STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL06695.1ABC transporter permease. (276 aa)    
Predicted Functional Partners:
KRL06694.1
ABC transporter ATP-binding protein.
 
 0.998
KRL05277.1
Aliphatic sulfonates import ATP-binding protein ssuB.
 
 0.993
KRL06696.1
ABC transporter substrate-binding protein.
  
 0.989
KRL06697.1
acetyl-CoA synthetase.
    0.911
KRL06698.1
Hypothetical protein.
 
     0.905
KRL06260.1
Acyltransferase.
 
     0.594
KRL05279.1
Aliphatic sulfonates-binding protein ssuA.
 
  
 0.569
KRL05278.1
Hypothetical protein.
  
  
 0.471
parC
DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.
       0.403
parE
DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.
       0.403
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
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