STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL06469.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
KRL06468.1
Hypothetical protein.
 
    0.970
KRL06747.1
Folylpolyglutamate synthase dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.
   
    0.636
KRL06470.1
Lipoprotein.
 
     0.621
KRL06471.1
Hypothetical protein.
 
     0.621
birA
Biotin operon repressor biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
     0.594
KRL06301.1
Hypothetical protein.
 
     0.568
KRL06741.1
Rod shape-determining protein MreD.
  
     0.488
KRL05302.1
Sulfatase family protein.
  
     0.443
KRL06805.1
Glutamate synthase large subunit.
       0.440
KRL07681.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.