STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL06031.1CAAX amino protease. (317 aa)    
Predicted Functional Partners:
KRL08170.1
MarR family transcriptional regulator.
 
     0.697
KRL06726.1
Hypothetical protein.
  
     0.628
KRL06736.1
Hypothetical protein.
  
    0.592
KRL06471.1
Hypothetical protein.
  
     0.588
KRL06957.1
Hypothetical protein.
  
     0.546
KRL07654.1
Hypothetical protein.
  
    0.533
KRL06032.1
Universal stress protein.
       0.532
KRL06030.1
Deoxyguanosine kinase.
       0.513
KRL05554.1
Multidrug ABC transporter permease.
  
    0.455
KRL07107.1
Hypothetical protein.
  
     0.449
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.