STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL05292.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
KRL06265.1
Iron-siderophore uptake ABC system ATP-binding component.
  
 
 0.932
KRL06266.1
Ferrichrome ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.919
KRL07447.1
Hypothetical protein.
  
     0.770
KRL07118.1
Cro CI family transcriptional regulator.
  
     0.770
KRL07448.1
Hypothetical protein.
  
     0.762
KRL07637.1
Hypothetical protein.
  
     0.748
KRL07449.1
Hypothetical protein.
  
     0.733
KRL06447.1
IpaB EvcA family protein.
  
     0.722
KRL07681.1
Hypothetical protein.
  
     0.717
KRL06021.1
YycH family protein.
  
     0.703
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.