STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL04083.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
KRL08359.1
Hypothetical protein.
  
     0.686
KRL07212.1
Teichoic acid translocation ATP-binding protein.
  
     0.598
KRL06642.1
Hypothetical protein.
  
     0.596
dacA
Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.570
KRL06558.1
Hypothetical protein.
  
    0.543
KRL07447.1
Hypothetical protein.
  
     0.527
KRL08333.1
Hypothetical protein.
  
     0.493
KRL06132.1
Hypothetical protein.
  
     0.485
KRL04081.1
YbbR family protein.
       0.483
KRL05292.1
Hypothetical protein.
  
     0.474
Your Current Organism:
Lactobacillus hordei
NCBI taxonomy Id: 1423759
Other names: L. hordei DSM 19519, Lactobacillus hordei DSM 19519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.