STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL89827.1Oligopeptide ABC superfamily ATP binding cassette transporter, permease protein. (305 aa)    
Predicted Functional Partners:
KRL89829.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 0.999
KRL89830.1
ABC superfamily ATP binding cassette transporter ABC protein; Belongs to the ABC transporter superfamily.
 
 0.999
KRL89828.1
Oligopeptide ABC transporter, permease protein.
 
 0.996
KRL90463.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 0.996
KRL90464.1
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.995
KRL89264.1
Oligopeptide ABC transporter, oligopeptide-binding protein.
 
 0.986
KRL90461.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.986
KRL89014.1
Oligopeptide ABC transporter binding protein.
 
 
 0.852
metN
ABC transporter, ATP binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 
  0.832
KRL89122.1
ABC amino acid transporter ATP-binding protein.
 
    
 0.793
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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