STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL91365.1GtrA family membrane protein. (140 aa)    
Predicted Functional Partners:
KRL91536.1
Transcriptional regulator.
  
     0.714
KRL91544.1
Transcriptional regulator.
  
     0.697
KRL91366.1
16s pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.
  
    0.663
KRL89106.1
Glycosyl transferase family 2.
  
 
 0.586
KRL90140.1
Glycosyltransferase-like protein.
  
 
 0.572
KRL89626.1
Hypothetical protein.
  
 
 0.572
KRL90894.1
Rhamnosyltransferase.
  
 
 0.572
KRL87972.1
Transcriptional regulator, xre family.
  
     0.554
KRL87517.1
XRE family transcriptional regulator.
  
     0.522
KRL89045.1
ABC transporter sugar binding protein.
  
     0.509
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.