STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL89133.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
KRL90818.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.879
KRL89662.1
Serine threonine protein phosphatase 1.
 
 0.851
KRL87162.1
Hypothetical protein.
  
 0.826
KRL89134.1
Hypothetical protein.
       0.773
KRL89135.1
Lactococcin A ABC transporter ATP binding protein.
  
    0.749
KRL89136.1
ABC transporter.
  
    0.724
KRL90936.1
PTS family fructose porter, IIABC component.
  
   0.685
KRL91353.1
Penicillin-binding protein 1.
  
 
 0.602
KRL90898.1
Exopolysaccharide biosynthesis protein.
    
   0.601
KRL91482.1
PTS family maltose glucose porter, IIABC component; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
 
  
  0.585
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.