STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL88660.1Response regulator. (144 aa)    
Predicted Functional Partners:
KRL89511.1
Hypothetical protein.
 
   
 0.841
KRL88659.1
Hypothetical protein.
       0.773
KRL91240.1
Hypothetical protein.
  
   
 0.621
KRL88863.1
AbpK sensory Transduction Histidine Kinase.
 
 
  0.587
KRL88875.1
Histidine kinase.
 
 
  0.576
KRL88643.1
Abc transporter.
 
    0.550
KRL89322.1
Histidine kinase.
 
 
  0.537
KRL88641.1
Hypothetical protein.
 
     0.527
KRL88661.1
Hypothetical protein.
       0.476
KRL88658.1
Periplasmic protease.
  
    0.473
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.