STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL88635.1Oligopeptide abc transporter substrate binding protein. (545 aa)    
Predicted Functional Partners:
KRL90461.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.924
KRL90462.1
Oligopeptide ABC superfamily ATP binding cassette transporter, permease protein.
 
 0.924
KRL90463.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 0.873
KRL90464.1
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.836
KRL89014.1
Oligopeptide ABC transporter binding protein.
  
  
 
0.733
KRL89828.1
Oligopeptide ABC transporter, permease protein.
 
 
 0.680
KRL89830.1
ABC superfamily ATP binding cassette transporter ABC protein; Belongs to the ABC transporter superfamily.
 
 
 0.673
KRL89827.1
Oligopeptide ABC superfamily ATP binding cassette transporter, permease protein.
 
 
 0.660
KRL89264.1
Oligopeptide ABC transporter, oligopeptide-binding protein.
  
 
0.640
KRL89829.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 
 0.624
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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