STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL88491.1Initiator RepB protein. (421 aa)    
Predicted Functional Partners:
KRL89693.1
Hypothetical protein.
  
     0.752
KRL88493.1
Hypothetical protein.
  
     0.721
KRL89821.1
Hypothetical protein.
  
     0.689
KRL90200.1
Phage integrase family integrase recombinase; Belongs to the 'phage' integrase family.
  
     0.488
KRL89864.1
Phage head protein.
  
     0.469
KRL89866.1
Phage terminase large subunit B.
  
     0.466
KRL89375.1
Hypothetical protein.
  
     0.458
KRL90575.1
Lysin.
  
     0.449
KRL90580.1
Gametolysin.
  
     0.440
KRL90098.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.