STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL87549.1Histidine protein kinase. (223 aa)    
Predicted Functional Partners:
KRL87548.1
Response regulator.
 
  
  0.972
KRL87547.1
Helix-turn-helix, Fis-type.
 
     0.922
KRL89010.1
Msm operon regulatory protein.
 
  
 0.544
KRL91548.1
Raffinose operon transcriptional regulator.
 
  
 0.524
KRL89044.1
Hypothetical protein.
 
  
 0.516
KRL89447.1
Transcriptional regulator, arac family.
 
  
 0.486
KRL91031.1
Hypothetical protein.
 
 
  0.473
KRL88874.1
AbpR response regulator.
 
 
  0.457
KRL88864.1
AbpR response regulator.
 
 
  0.450
KRL89323.1
Response regulator.
 
 
  0.446
Your Current Organism:
Lactobacillus kalixensis
NCBI taxonomy Id: 1423763
Other names: L. kalixensis DSM 16043, Lactobacillus kalixensis DSM 16043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.