STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM52697.1Hypothetical protein. (709 aa)    
Predicted Functional Partners:
KRM53414.1
Collagen binding domain-containing protein.
 
     0.775
KRM54117.1
Hypothetical protein.
  
     0.770
KRM53215.1
Hypothetical protein.
 
   
 0.754
KRM53559.1
Lipoprotein.
  
     0.744
KRM54113.1
Hypothetical protein.
  
  
 0.743
KRM53218.1
Hypothetical protein.
 
   
 0.742
KRM53208.1
Hypothetical protein.
 
    0.723
KRM50066.1
Hypothetical protein.
  
     0.723
KRM54112.1
Hypothetical protein.
  
     0.717
KRM52495.1
Hypothetical protein.
  
     0.706
Your Current Organism:
Lactobacillus kefiri
NCBI taxonomy Id: 1423764
Other names: L. kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri DSM 20587, Lactobacillus kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri JCM 5818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.