STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain amino acid aminotransferase. (341 aa)    
Predicted Functional Partners:
KRM52439.1
Glutathione synthase; Belongs to the glutamate--cysteine ligase type 1 family.
  
 
 0.910
gshA
Glutathione synthase; Belongs to the glutamate--cysteine ligase type 1 family.
     
  0.900
gshA-2
Glutathione synthase; Belongs to the glutamate--cysteine ligase type 1 family.
     
  0.900
KRM53944.1
Homoserine dehydrogenase.
  
 
 0.875
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.828
thrB-2
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.828
hicD2
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.817
hicD2-2
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.817
ldh1-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 0.817
hisI
phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.711
Your Current Organism:
Lactobacillus kefiri
NCBI taxonomy Id: 1423764
Other names: L. kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri DSM 20587, Lactobacillus kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri JCM 5818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.