STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM51632.1Pyridoxamine 5-phosphate oxidase-related FMN-binding protein. (133 aa)    
Predicted Functional Partners:
KRM51633.1
VanZ family protein.
       0.605
KRM53930.1
Hypothetical protein.
  
     0.599
pdxK
Phosphomethylpyrimidine kinase type-1.
  
  
  0.558
KRM53739.1
Acyltransferase 3.
  
     0.461
KRM49827.1
Glycoside hydrolase family protein.
  
     0.449
KRM51641.1
Hypothetical protein.
  
     0.420
KRM49978.1
Bleomycin resistance protein.
 
     0.403
KRM52428.1
Acyltransferase 3.
  
     0.401
Your Current Organism:
Lactobacillus kefiri
NCBI taxonomy Id: 1423764
Other names: L. kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri DSM 20587, Lactobacillus kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri JCM 5818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.