STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM54135.1Phage terminase, large subunit. (631 aa)    
Predicted Functional Partners:
KRM54134.1
Hypothetical protein.
 
    0.971
clpP-2
Peptidase S14 ClpP; Belongs to the peptidase S14 family.
 
     0.901
KRM54138.1
Phage major capsid protein, HK97 family.
 
     0.900
pi135
Phage portal protein, HK97 family.
 
   
 0.890
KRM54140.1
Head-tail joining protein.
 
     0.860
KRM54142.1
Phage major tail protein.
 
     0.859
KRM54141.1
Hypothetical protein.
 
     0.857
KRM53039.1
Hypothetical protein.
 
   
 0.818
KRM53038.1
Hypothetical protein.
 
     0.814
KRM54144.1
Phage tail tape measure protein, TP901 family.
 
     0.800
Your Current Organism:
Lactobacillus kefiri
NCBI taxonomy Id: 1423764
Other names: L. kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri DSM 20587, Lactobacillus kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri JCM 5818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.