STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM53975.1Hypothetical protein. (626 aa)    
Predicted Functional Partners:
ddpX
Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. Belongs to the peptidase M15D family.
       0.700
KRM53686.1
Coenzyme F420-dependent NADP oxidoreductase.
 
     0.689
KRM50707.1
Hypothetical protein.
  
     0.645
KRM52457.1
G-D-S-L family lipolytic protein.
  
     0.601
nnrE
YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
       0.557
rpmG1
Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family.
 
   
 0.517
KRM50398.1
Hypothetical protein.
  
     0.486
KRM53448.1
ABC transporter permease.
  
     0.479
KRM53972.1
Hypothetical protein.
 
     0.474
KRM53555.1
Carboxylic ester hydrolase.
  
     0.457
Your Current Organism:
Lactobacillus kefiri
NCBI taxonomy Id: 1423764
Other names: L. kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri DSM 20587, Lactobacillus kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri JCM 5818
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.