STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM54000.1Phosphoketolase. (799 aa)    
Predicted Functional Partners:
KRM53719.1
D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase.
  
  
 
0.901
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
     
  0.900
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.832
Gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.831
gapA
Type I glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.831
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.828
ldh1-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
    
 0.821
eno1
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.820
hicD2
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 0.812
hicD2-2
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
 0.812
Your Current Organism:
Lactobacillus kefiri
NCBI taxonomy Id: 1423764
Other names: L. kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri DSM 20587, Lactobacillus kefiri DSM 20587 = JCM 5818, Lactobacillus kefiri JCM 5818
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.