STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL44085.1Hypothetical protein. (409 aa)    
Predicted Functional Partners:
KRL45892.1
Transport protein.
 
   
 0.688
KRL45233.1
Integral membrane protein.
  
     0.651
KRL44452.1
Hypothetical protein.
  
     0.650
KRL44150.1
NUDIX family hydrolase.
 
    0.596
KRL44086.1
Hypothetical protein.
     
 0.550
KRL45889.1
Hypothetical protein.
 
     0.514
KRL45945.1
ABC transporter.
 
 
 0.491
KRL45016.1
Carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
   
 
 0.489
KRL45744.1
lacY protein.
    
 0.471
KRL45253.1
Cell surface protein.
  
     0.455
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.