STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL43642.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
KRL44320.1
Beta-glucosides PTS, EIIABC.
    
  0.870
KRL44057.1
N-acetylglucosamine and glucose PTS, EIICBA.
    
  0.870
KRL44908.1
PTS family glucose glucoside (glc) porter component IIA.
    
  0.870
KRL42888.1
N-acetylglucosamine and glucose PTS, EIICBA.
    
  0.870
KRL42747.1
PTS system glucose-specific transporter subunit IICBA.
    
  0.870
KRL43641.1
Hypothetical protein.
  
    0.834
KRL45928.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.830
KRL43644.1
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
    0.793
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
    0.771
KRL43639.1
Drug Na(+) antiporter (drug efflux pump).
 
     0.727
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.