STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL43267.1Hypothetical protein. (852 aa)    
Predicted Functional Partners:
KRL44309.1
Rok family transcriptional repressor.
  
     0.769
KRL44822.1
Hypothetical protein.
  
     0.766
KRL42991.1
Hypothetical protein.
  
    0.763
KRL45310.1
UvrD REP helicase.
  
   
 0.752
KRL43140.1
Permease.
  
     0.745
KRL44165.1
Hypothetical protein.
 
     0.726
KRL43504.1
Membrane associated lipoprotein.
  
     0.720
KRL45014.1
Hypothetical protein.
  
     0.710
KRL43659.1
CAAX family membrane-bound protease.
  
     0.707
KRL43498.1
Hypothetical protein.
  
     0.699
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.