STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL43090.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
KRL43091.1
Hypothetical protein.
 
    0.932
KRL43092.1
Glycosyltransferase.
 
    0.924
KRL43093.1
Putative glycosyltransferase (putative).
 
    0.923
KRL43094.1
Hypothetical protein.
 
    0.883
KRL43095.1
Integral membrane protein.
 
     0.876
KRL44912.1
Hypothetical protein.
  
     0.499
KRL43089.1
Hypothetical protein.
      
0.474
KRL45252.1
Cell surface protein.
  
     0.433
KRL43197.1
Hypothetical protein.
 
    0.419
KRL43345.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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