STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citGtriphosphoribosyl-dephospho-CoA synthase. (270 aa)    
Predicted Functional Partners:
KRL42796.1
citX protein.
 
 0.999
KRL42800.1
Hypothetical protein; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
  
 0.997
citD
Hypothetical protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.988
KRL42798.1
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.983
KRL42797.1
Citrate lyase alpha subunit.
 
  
 0.978
KRL42801.1
Citrate-sodium symporter.
 
     0.864
KRL42802.1
Nad-dependent malic enzyme.
     
 0.778
KRL42803.1
Citrate lyase regulator.
 
     0.677
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.