STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL42724.1Adhesion exoprotein. (1161 aa)    
Predicted Functional Partners:
KRL45563.1
Hypothetical protein.
 
   0.883
KRL43107.1
Hypothetical protein.
 
   0.782
KRL46056.1
Hypothetical protein.
 
   0.769
KRL43504.1
Membrane associated lipoprotein.
 
     0.726
KRL45253.1
Cell surface protein.
  
   0.724
KRL46055.1
Hypothetical protein.
  
   0.724
KRL43267.1
Hypothetical protein.
  
     0.665
KRL44056.1
Hypothetical protein.
 
     0.664
KRL45710.1
PrtP.
  
     0.660
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.649
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.