STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL42649.1Transcription regulator. (181 aa)    
Predicted Functional Partners:
KRL42650.1
Transport protein; Belongs to the major facilitator superfamily.
 
     0.805
KRL45352.1
Collagen adhesin.
  
     0.522
KRL44786.1
Transcription regulator.
  
     0.502
KRL42648.1
Metal uptake regulator; Belongs to the Fur family.
       0.479
KRL43132.1
Hypothetical protein.
  
     0.472
KRL44798.1
Hypothetical protein.
 
     0.446
KRL44568.1
Transcription regulator.
  
     0.444
KRL44564.1
Csn protein.
  
     0.440
KRL42646.1
Histidine protein kinase.
 
     0.425
KRL44563.1
Major facilitator superfamily permease.
 
     0.423
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.