STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL44452.1Hypothetical protein. (525 aa)    
Predicted Functional Partners:
KRL44453.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
     0.954
KRL44085.1
Hypothetical protein.
  
     0.650
KRL43267.1
Hypothetical protein.
  
     0.589
KRL45352.1
Collagen adhesin.
  
     0.568
KRL45892.1
Transport protein.
  
     0.561
KRL44567.1
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein.
  
     0.537
KRL44150.1
NUDIX family hydrolase.
  
     0.532
KRL45329.1
PrtP.
  
     0.487
KRL45233.1
Integral membrane protein.
  
     0.455
KRL45310.1
UvrD REP helicase.
  
     0.434
Your Current Organism:
Lactobacillus mindensis
NCBI taxonomy Id: 1423770
Other names: L. mindensis DSM 14500, Lactobacillus mindensis DSM 14500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.