STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73647.1Phosphonate-transporting ATPase. (641 aa)    
Predicted Functional Partners:
KRK76176.1
Abc transporter, permease protein.
  
 0.999
KRK75777.1
Peptide ABC transporter permease.
  
 0.834
KRK78149.1
Peptide ABC transporter permease.
  
 0.784
thiE
Thiamine monophosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
  
   0.603
KRK74936.1
Hypothetical protein.
 
 
 
 0.577
KRK73649.1
Hydroxymethylpyrimidine phosphomethylpyrimidine kinase.
       0.548
KRK76820.1
Glutamine abc transporter, substrate binding and permease protein.
 
  
 0.529
KRK72725.1
ABC-type amino acid transport system, permease and periplasmic component.
 
  
 0.529
KRK77246.1
Hypothetical protein.
   
 
 0.498
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
       0.496
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.