STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK76966.1Hypothetical protein. (845 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
  
 
  0.818
KRK74906.1
Hypothetical protein.
  
     0.773
KRK75516.1
Hypothetical protein.
  
     0.768
KRK76967.1
Hypothetical protein.
       0.689
KRK76518.1
Na+ xyloside symporter related transporter.
    
   0.679
KRK78240.1
Hypothetical protein.
  
     0.672
KRK75766.1
Abc superfamily atp binding cassette transporter, abc and permease protein.
  
     0.654
KRK76452.1
Hypothetical protein.
  
     0.651
KRK73079.1
Hypothetical protein.
  
     0.647
KRK75489.1
Prophage lp4 protein 7, dna replication.
  
     0.634
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.