STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73116.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
KRK73117.1
Hypothetical protein.
  
    0.835
KRK77400.1
Hypothetical protein.
  
     0.655
KRK77343.1
Hypothetical protein; Belongs to the HesB/IscA family.
  
     0.557
KRK73027.1
Hypothetical protein.
  
     0.551
KRK74529.1
Hypothetical protein.
  
     0.549
KRK73579.1
Alpha beta hydrolase.
  
     0.520
KRK73614.1
Hypothetical protein.
  
     0.520
KRK74907.1
Hypothetical protein; Belongs to the HesB/IscA family.
  
     0.514
KRK73118.1
Lipoate-protein ligase A.
  
    0.509
KRK76709.1
Glycerophosphoryl diester phosphodiesterase.
  
     0.495
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
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