STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK72994.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
   
 
  0.782
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.755
KRK76983.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.716
KRK73504.1
Hypothetical protein.
  
 
   0.658
KRK74473.1
Hypothetical protein.
  
     0.567
KRK73547.1
Pentapeptide repeat protein.
   
 
 0.535
KRK78240.1
Hypothetical protein.
 
    0.489
KRK77345.1
Hypothetical protein.
    
   0.489
KRK72995.1
Hypothetical protein.
  
     0.481
KRK75487.1
Hypothetical protein.
  
  
  0.473
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.