STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK73000.1UspA family nucleotide-binding protein. (166 aa)    
Predicted Functional Partners:
KRK76146.1
Hypothetical protein.
  
     0.633
KRK73533.1
Hypothetical protein.
  
     0.592
KRK73532.1
Hypothetical protein.
  
     0.574
KRK73001.1
HAD family sugar phosphatase.
  
    0.543
KRK73011.1
Phosphoenolpyruvate carboxykinase.
  
    0.536
KRK75940.1
Hypothetical protein.
  
     0.533
KRK72999.1
Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.502
KRK73778.1
Hypothetical protein.
  
     0.484
KRK72995.1
Hypothetical protein.
 
    0.471
KRK76692.1
Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
     0.457
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
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