STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK76279.1Hypothetical protein. (946 aa)    
Predicted Functional Partners:
KRK76282.1
Hypothetical protein.
 
 
 0.990
KRK76280.1
Hypothetical protein.
 
 0.984
KRK76284.1
CRISPR associated family protein.
 
 
 
 0.980
KRK76283.1
Crispr-associated protein.
 
 
 0.979
KRK72784.1
Hypothetical protein.
 
 
 0.958
KRK72785.1
Hypothetical protein.
 
 
 0.958
KRK76281.1
Crispr-associated protein, cse2 family.
 
  
 0.954
KRK77094.1
Hypothetical protein.
 
 
 0.931
KRK72787.1
CRISPR-associated protein, Cse1 family.
 
 
 0.931
cas1-2
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.900
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.