STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK77395.1Cell wall-associated hydrolase. (536 aa)    
Predicted Functional Partners:
KRK76983.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.834
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.785
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
  
 
  0.784
KRK73504.1
Hypothetical protein.
  
 
   0.562
KRK73547.1
Pentapeptide repeat protein.
   
 
 0.553
KRK73771.1
Hypothetical protein.
  
     0.507
rbsK
Ribokinase family sugar kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.497
KRK73509.1
Periplasmic protease.
  
  
 0.496
KRK77396.1
Hypothetical protein.
       0.491
KRK77345.1
Hypothetical protein.
    
   0.489
Your Current Organism:
Lactobacillus namurensis
NCBI taxonomy Id: 1423773
Other names: L. namurensis DSM 19117, Lactobacillus namurensis DSM 19117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.