STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM16828.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
KRM16827.1
Hypothetical protein.
 
  
 0.985
KRM16829.1
Beta-lactamase superfamily hydrolase.
  
  
 0.913
KRM16826.1
Two-component system, sensor histidine kinase.
 
  
 0.821
KRM14516.1
Hypothetical protein.
  
     0.710
KRM14021.1
CBS domain-containing protein.
  
     0.709
KRM14698.1
Hypothetical protein.
  
     0.673
KRM17728.1
Adenine-specific DNA methyltransferase.
  
     0.619
KRM18501.1
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.615
KRM14454.1
Septation ring formation regulator EzrA.
  
     0.611
KRM16382.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.599
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.