STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM16243.1DMT family permease. (351 aa)    
Predicted Functional Partners:
KRM17241.1
Hypothetical protein.
  
     0.542
KRM16242.1
NADP-dependent oxidoreductase domain-containing protein.
  
    0.527
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.515
KRM15776.1
Hypothetical protein.
    
 0.489
KRM14277.1
Xaa-Pro dipeptidase.
    
 0.489
KRM14947.1
Hypothetical protein.
  
     0.487
KRM18678.1
Glycopeptide antibiotics resistance protein.
 
 
  0.482
KRM18680.1
Glycopeptide antibiotics resistance protein.
 
 
  0.462
KRM16241.1
NAD-dependent epimerase dehydratase.
     
 0.455
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.