STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM15891.1Diguanylate cyclase phosphodiesterase domain 2 containing protein. (232 aa)    
Predicted Functional Partners:
KRM18258.1
Protein containing diguanylate cyclase phosphodiesterase domain 1 (ggdef).
 
 0.834
KRM18256.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 
 0.831
KRM14612.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 0.825
KRM16378.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 0.806
KRM17240.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
  
     0.663
KRM17451.1
GGDEF domain-containing protein.
 
 
 0.647
KRM18257.1
Hypothetical protein.
 
 
 0.589
KRM15890.1
NADH oxidase.
       0.559
KRM17449.1
Hypothetical protein.
 
 
 0.497
KRM17446.1
Hypothetical protein.
  
    0.472
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.